CDS
| Accession Number | TCMCG034C02204 |
| gbkey | CDS |
| Protein Id | XP_008339935.2 |
| Location | complement(join(5465903..5466124,5466355..5466597,5466837..5467497,5467630..5467862)) |
| Gene | LOC103402928 |
| GeneID | 103402928 |
| Organism | Malus domestica |
Protein
| Length | 452aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA534520 |
| db_source | XM_008341713.3 |
| Definition | probable pectate lyase 3 [Malus domestica] |
EGGNOG-MAPPER Annotation
| COG_category | G |
| Description | Pectate lyase |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction |
R02361
[VIEW IN KEGG] R06240 [VIEW IN KEGG] |
| KEGG_rclass |
RC00049
[VIEW IN KEGG] RC00705 [VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K01728
[VIEW IN KEGG] |
| EC |
4.2.2.2
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00040
[VIEW IN KEGG] ko02024 [VIEW IN KEGG] map00040 [VIEW IN KEGG] map02024 [VIEW IN KEGG] |
| GOs |
GO:0003674
[VIEW IN EMBL-EBI] GO:0003824 [VIEW IN EMBL-EBI] GO:0008150 [VIEW IN EMBL-EBI] GO:0009664 [VIEW IN EMBL-EBI] GO:0009987 [VIEW IN EMBL-EBI] GO:0016043 [VIEW IN EMBL-EBI] GO:0016829 [VIEW IN EMBL-EBI] GO:0016835 [VIEW IN EMBL-EBI] GO:0016837 [VIEW IN EMBL-EBI] GO:0030570 [VIEW IN EMBL-EBI] GO:0045229 [VIEW IN EMBL-EBI] GO:0071554 [VIEW IN EMBL-EBI] GO:0071555 [VIEW IN EMBL-EBI] GO:0071669 [VIEW IN EMBL-EBI] GO:0071840 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGTAGCCATGTTTAACTCGTCCTATTTCTTTCTATTTTTGTTTTTCTTGTACTTTGCTGTATTCGTTTCGAGCAACGATAATCCAACCGATGTTCCAAATGAAGATACGCTGGTATTAGATTTAGATGCGTACTGGAAAGAACGAGCCGAAGAAGCTGAAAAGGTGGCCATGGAATCCTACAATAAAAATCCTGAGAAAGTCACTGAAGAGTTCAATACTGAAGTTGGCAAGCTTATGTCGAAGGAAAACACCACAAGAAGGAACTTGAGGGGTAACAAGGCTTATACGGGTCCATGCATGGCGACCAACCCAATGGACGCCTGTTGGAGGTGTGACCCTAACTGGGCCAACAACCGAAAGAAGATTGTAGGCTGCGCCCAAGGCTTCGGTAAAAAGACCACCGGAGGGAAGGATGGTCCTTTTTACGTGGTGACAATGGGCACAGATGATGACGTGCAAAACCCTAAACCAGGAACCCTACGCCATGCCGTGATTCAGAAAGGGCCTTTGTGGATCATCTTCACAAAAAGCATGGTGATTAGGCTGCAGCAAGAGCTGATGGTGACTAGTGACAAGACCATTGATGCTAGGGGAGCCAATGTTGTGATAGAAGAGGGTGCTGGCATTACCCTGCAGTTTGTGAAGAATGTAATCATCACCAACCTTCACATAAAAATGATTGTCACCAAACCCGGTGGCCTGATCAGGGACTCTGTCGACCACATAGGTTTAAGGACCCAGAGTGACGGCGATGGTATCTCCCTCTTTGGTGCCTCCAACGTCTGGATCGATCACGTTTCCATGTCCAGGTGCGCAGATGGGCTCATCGACGCCATCATGGGTTCCACCGCCATCACCATCTCCAACTCCCACTTCACTGACCACGATGAGGCGATGTTGTTTGGTGCCAACAACGCCCACACTCAAGACAAAATCATGCAAATTACTTTGGCCTTCAACCACTTTGGTCAGGGACTGGTGCAGAGGATGCCAAGGGTCCGGCACGGATTCTTCCACGTGGTGAACAACGACTACACCCACTGGATCATGTATGCCATCGGAGGAAACATGAACCCTACCATCATCAGCCAGGGTAACAGGTTCATTGCTCCCATTAACGGGGTCACCAAACAGGTGACCCATAGGGAGAATACACCAGAGGCAGAGTGGAAGAACTGGGAATGGAGATCTGAGGGAGATTTGATGATGAATGGAGCTTTCTTTGTTGAATCTGGATCAGGAGCCAGCAAACACCCAGCAAAGTTGGACCTGATGCCCTTCAAACCAGGGACCCTTGTCTCAACGCTCACAAAATTTTCCGGTGCTCTAAACTGTGCTGTCGGCAAACCCTGCTAG |
| Protein: MVAMFNSSYFFLFLFFLYFAVFVSSNDNPTDVPNEDTLVLDLDAYWKERAEEAEKVAMESYNKNPEKVTEEFNTEVGKLMSKENTTRRNLRGNKAYTGPCMATNPMDACWRCDPNWANNRKKIVGCAQGFGKKTTGGKDGPFYVVTMGTDDDVQNPKPGTLRHAVIQKGPLWIIFTKSMVIRLQQELMVTSDKTIDARGANVVIEEGAGITLQFVKNVIITNLHIKMIVTKPGGLIRDSVDHIGLRTQSDGDGISLFGASNVWIDHVSMSRCADGLIDAIMGSTAITISNSHFTDHDEAMLFGANNAHTQDKIMQITLAFNHFGQGLVQRMPRVRHGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPINGVTKQVTHRENTPEAEWKNWEWRSEGDLMMNGAFFVESGSGASKHPAKLDLMPFKPGTLVSTLTKFSGALNCAVGKPC |